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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899566.1_cds_XP_016449551.1_44088
CDS Infomation

[gene=LOC107774513] [db_xref=GeneID:107774513] [protein=protein ROOT INITIATION DEFECTIVE 3-like] [protein_id=XP_016449551.1] [location=complement(join(92785..92949,94223..94470,94922..95049,95702..95901,96133..96280,96369..96502,96601..96714,96878..97090))] [gbkey=CDS]
Sequence

ATGACGGAGCTGGAATTGGTAATCGCGTCGTCGCCGACCGACGCCGGTATCGGCTGTTGG
GACCTCCATACTGGCGCCGAGCACCTTCGTCATCGGTCTTGCTCCTCCCCTTCTCATGGC
CTCGTCTGTGTCGGCGGCCGTTTTCTCGCCTCCTCTCAACTCTGTGCTTCCAAATCGTCG
TCAGGATCTATCCTTTACTGGTCCTGGAACAAGCCTCAAGTTGAAGTTAAAAGCTTTCCA
GCGGAACCTATAAATCCACTTGTTTGCAACAATGAGGGAACTTATATGGCCGGAGGAGGT
GCATCCGGTGATATATACTTGTGGCAGGTTGCGACTGGTAAACTACTTAAGAAGTGGCAT
GCTCACTATAGGGCAGTTACTTGCTTGAAATTCAATGATGATCAATCGCTTCTGATTTCT
GGTTCAGAGGATGGATCTGTTCGAGTTTGGTCTCTTATAATGGTATTTGATGATTTGTTG
AGGGATAAAGCAAGACAGCCTTACGAGTATAGTTTCTCTGAGCATTCTTTGAAGGTGACT
GATGTTGTGACTGGTTATGGCGGAGCTAATGCAATTGTTGTATCTGCCTCAGAAGATAGA
ACTTGCAAGGTATGGAGTTTGTCGAGAGGAAAATTGTTGAGAAACATTGTGTTTCCATCA
GTAATTGATGCAATTGCATTGGACCCAGGAGAAGATGTCTTCTATGCTGGTGGTAGAGAT
GGGAAAATTTACATAGCTGCAGTAAATGCTGTTGCTGACTCCAACAGTAATTACGGATTG
CACATTCTTGGTTTTCTGTCTGAGCAAAGTAAGGCTATTACATGCTTAGCATTAACTACT
GACGGGGGCTTGCTAATTTCTGGATCAGAGGATGGCATGGTTCGGGTGTGGAACACTAAA
GACCATAACATCGCCCGAATTTTTAGGCATGCAAAAGGCCCAGTTAACAATATAGTTGTT
GTTAGACAACCATCTCTCCTGAGTACCAGTGGATCTGTGAGTTCCCAAGTACCCTCCGTA
AAGAGACATGGGGCATCATTACCACCCCCATTGGAAAAGTATGCTAACTCAGCAGATGAT
AATGATTATATGGCAGTAATTGGCCCCCGATTCAATCATGATAGATCTGTTGAAGCTTCA
TATATCAGTGTTCAGACACTAAATAATCAAATCTTAGAGCTTCAGAGACAAGGGTCTTCT
GCTGCTGCTCAAATGGAGATCGAAAAGCTAAAACTCGACCGCGGCAGGTCCATACAAATG
ATTCAGCAATGGGAAAAGAAGTATCAAAATCTACATCAGTTTTGTGTAACCGAGCTATTG
GATGGGGAACCAGCTGGAAATGCTGTGTGA

Peptide Sequence

PEP ID

XP_016449551.1
PEP Infomation

PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Nicotiana tabacum]
Sequence

MTELELVIASSPTDAGIGCWDLHTGAEHLRHRSCSSPSHGLVCVGGRFLASSQLCASKSS
SGSILYWSWNKPQVEVKSFPAEPINPLVCNNEGTYMAGGGASGDIYLWQVATGKLLKKWH
AHYRAVTCLKFNDDQSLLISGSEDGSVRVWSLIMVFDDLLRDKARQPYEYSFSEHSLKVT
DVVTGYGGANAIVVSASEDRTCKVWSLSRGKLLRNIVFPSVIDAIALDPGEDVFYAGGRD
GKIYIAAVNAVADSNSNYGLHILGFLSEQSKAITCLALTTDGGLLISGSEDGMVRVWNTK
DHNIARIFRHAKGPVNNIVVVRQPSLLSTSGSVSSQVPSVKRHGASLPPPLEKYANSADD
NDYMAVIGPRFNHDRSVEASYISVQTLNNQILELQRQGSSAAAQMEIEKLKLDRGRSIQM
IQQWEKKYQNLHQFCVTELLDGEPAGNAV

Transcript Sequence

Gene sequence data has not been registered.